STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105021040Uncharacterized protein. (715 aa)    
Predicted Functional Partners:
LOC105008094
Uncharacterized protein.
    
 0.946
LOC105014132
Notch receptor 1b.
    
 0.946
LOC105011625
Notch receptor 2.
    
 0.930
LOC105030547
E3 ubiquitin-protein ligase.
    
 0.643
LOC105022768
E3 ubiquitin-protein ligase.
    
 0.643
wwp1
E3 ubiquitin-protein ligase.
    
 0.643
wwp2
E3 ubiquitin-protein ligase.
    
 0.643
rps27a
Ribosomal protein S27a.
    
  0.614
ENSELUP00000003468
Ubiquitin-like domain-containing protein.
    
 0.563
LOC105021636
E3 ubiquitin-protein ligase.
    
 0.433
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.