STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
stk25Serine/threonine kinase 25b. (423 aa)    
Predicted Functional Partners:
lrsam1
Leucine rich repeat and sterile alpha motif containing 1.
   
 
 0.718
LOC105029469
Achaete-scute family bHLH transcription factor 1b.
   
 
 0.718
pdcd10
Uncharacterized protein.
    
 
 0.716
LOC105019861
Programmed cell death 10b.
    
 
 0.716
slmap
Sarcolemma associated protein a.
    
 
 0.650
ENSELUP00000006392
Im:7152348.
    
 0.648
LOC105011486
Protein phosphatase 2, regulatory subunit A, beta b.
   
 
 0.643
LOC105026395
Calcium binding protein 39, like 1.
    
 
 0.638
LOC105019836
Calcium binding protein 39-like.
    
 
 0.638
cab39
Calcium binding protein 39.
    
 
 0.638
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.