STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Fmn1Uncharacterized protein. (1060 aa)    
Predicted Functional Partners:
pfn4
Profilin; Belongs to the profilin family.
    
 0.626
suox
Sulfite oxidase.
      
 0.593
LOC105025353
Profilin; Belongs to the profilin family.
    
 0.529
LOC105006401
Profilin; Belongs to the profilin family.
    
 0.529
LOC105028925
Profilin; Belongs to the profilin family.
    
 0.529
PFN3
Profilin; Belongs to the profilin family.
    
 0.518
washc1
WAS protein family homolog 1.
    
 0.513
LOC105028923
Uncharacterized protein.
    
 0.487
actl6a
Actin-like 6A; Belongs to the actin family.
   
 0.479
LOC105018477
Myosin IXAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 0.470
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.