Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BSN | aven | ENSELUP00000033004 | ENSELUP00000020268 | Bassoon presynaptic cytomatrix protein. | Apoptosis, caspase activation inhibitor. | 0.599 |
ENSELUP00000001969 | aven | ENSELUP00000001969 | ENSELUP00000020268 | Cystatin domain-containing protein; Belongs to the cystatin family. | Apoptosis, caspase activation inhibitor. | 0.599 |
ENSELUP00000002257 | apaf1 | ENSELUP00000002257 | ENSELUP00000026100 | Uncharacterized protein. | Apoptotic peptidase activating factor 1. | 0.456 |
ENSELUP00000002257 | aven | ENSELUP00000002257 | ENSELUP00000020268 | Uncharacterized protein. | Apoptosis, caspase activation inhibitor. | 0.825 |
ENSELUP00000002257 | casp9 | ENSELUP00000002257 | ENSELUP00000028127 | Uncharacterized protein. | Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | 0.615 |
LOC105007513 | aven | ENSELUP00000027214 | ENSELUP00000020268 | Cystatin 14a, tandem duplicate 1; Belongs to the cystatin family. | Apoptosis, caspase activation inhibitor. | 0.599 |
LOC105009750 | aven | ENSELUP00000034123 | ENSELUP00000020268 | Cystatin domain-containing protein; Belongs to the cystatin family. | Apoptosis, caspase activation inhibitor. | 0.599 |
LOC105027676 | aven | ENSELUP00000040806 | ENSELUP00000020268 | Cystatin domain-containing protein. | Apoptosis, caspase activation inhibitor. | 0.599 |
apaf1 | ENSELUP00000002257 | ENSELUP00000026100 | ENSELUP00000002257 | Apoptotic peptidase activating factor 1. | Uncharacterized protein. | 0.456 |
apaf1 | aven | ENSELUP00000026100 | ENSELUP00000020268 | Apoptotic peptidase activating factor 1. | Apoptosis, caspase activation inhibitor. | 0.972 |
apaf1 | casp9 | ENSELUP00000026100 | ENSELUP00000028127 | Apoptotic peptidase activating factor 1. | Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | 0.998 |
aven | BSN | ENSELUP00000020268 | ENSELUP00000033004 | Apoptosis, caspase activation inhibitor. | Bassoon presynaptic cytomatrix protein. | 0.599 |
aven | ENSELUP00000001969 | ENSELUP00000020268 | ENSELUP00000001969 | Apoptosis, caspase activation inhibitor. | Cystatin domain-containing protein; Belongs to the cystatin family. | 0.599 |
aven | ENSELUP00000002257 | ENSELUP00000020268 | ENSELUP00000002257 | Apoptosis, caspase activation inhibitor. | Uncharacterized protein. | 0.825 |
aven | LOC105007513 | ENSELUP00000020268 | ENSELUP00000027214 | Apoptosis, caspase activation inhibitor. | Cystatin 14a, tandem duplicate 1; Belongs to the cystatin family. | 0.599 |
aven | LOC105009750 | ENSELUP00000020268 | ENSELUP00000034123 | Apoptosis, caspase activation inhibitor. | Cystatin domain-containing protein; Belongs to the cystatin family. | 0.599 |
aven | LOC105027676 | ENSELUP00000020268 | ENSELUP00000040806 | Apoptosis, caspase activation inhibitor. | Cystatin domain-containing protein. | 0.599 |
aven | apaf1 | ENSELUP00000020268 | ENSELUP00000026100 | Apoptosis, caspase activation inhibitor. | Apoptotic peptidase activating factor 1. | 0.972 |
aven | casp9 | ENSELUP00000020268 | ENSELUP00000028127 | Apoptosis, caspase activation inhibitor. | Caspase 9, apoptosis-related cysteine peptidase; Belongs to the peptidase C14A family. | 0.629 |
aven | cyt | ENSELUP00000020268 | ENSELUP00000012424 | Apoptosis, caspase activation inhibitor. | Cystatin; Belongs to the cystatin family. | 0.599 |
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