STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
neurl4Neuralized E3 ubiquitin protein ligase 4. (1542 aa)    
Predicted Functional Partners:
mapk6
Mitogen-activated protein kinase 6.
    
 
 0.734
cep120
Centrosomal protein 120.
    
 0.618
cep290
Centrosomal protein 290.
    
 0.598
elp5
Elongator acetyltransferase complex subunit 5.
      
 0.595
ENSELUP00000004765
HECT domain-containing protein.
    
 
 0.525
ENSELUP00000029039
Hect domain and RLD 7.
    
 
 0.525
ENSELUP00000031806
HECT domain-containing protein.
    
 
 0.525
ENSELUP00000031810
Uncharacterized protein.
    
 
 0.525
herc1
HECT and RLD domain containing E3 ubiquitin protein ligase family member 1.
    
 
 0.525
ktn1
Kinectin 1.
    
 0.521
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.