STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105011508Neurocan b. (1377 aa)    
Predicted Functional Partners:
vcan
Versican b.
  
 
0.645
LOC105015151
Uncharacterized protein.
    
0.588
LOC105025660
Protein tyrosine phosphatase receptor type Z1b.
   
 
 0.554
LOC105028676
Brevican.
   
0.516
BCAN
Brevican.
   
0.516
lgmn
Legumain.
   
 
 0.501
ENSELUP00000013122
WD repeat domain 18.
   
 0.496
ENSELUP00000000841
Uncharacterized protein.
     
 0.486
LOC105014395
Tenascin C.
   
 0.485
ENSELUP00000033163
Tenascin N.
    
 0.484
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.