STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d32TBC1 domain family, member 32. (1302 aa)    
Predicted Functional Partners:
cfap20
Cilia and flagella associated protein 20.
    
 
 0.797
ENSELUP00000035069
WD repeat containing planar cell polarity effector.
   
  
 0.692
LOC105018702
UEV domain-containing protein.
      
 0.691
sclt1
Sodium channel and clathrin linker 1.
      
 0.593
ddx59
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59.
      
 0.527
fam149b1
Family with sequence similarity 149 member B1.
    
 
 0.499
ENSELUP00000011438
Family with sequence similarity 149 member A.
    
 
 0.499
wdr90
WD repeat domain 90.
    
 
 0.493
lg17h3orf67
Zgc:162324.
    
 
 0.493
arl2bp
ADP-ribosylation factor-like 2 binding protein.
      
 0.461
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.