STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tbc1d9bTBC1 domain family, member 9 (with GRAM domain). (1228 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 
 0.926
dnajc6
DnaJ (Hsp40) homolog, subfamily C, member 6.
   
 
  0.651
snapin
SNAP associated protein.
     
 0.545
ap5m1
Adaptor related protein complex 5 subunit mu 1; Belongs to the adaptor complexes medium subunit family.
     
 0.535
igf2r
Insulin-like growth factor 2 receptor.
   
 
  0.533
ap1b1
AP complex subunit beta.
   
 
  0.499
ap2b1
AP complex subunit beta.
   
 
  0.499
yipf6
Protein YIPF.
   
 
  0.495
sort1
Sortilin.
    
  0.493
ENSELUP00000015393
Huntingtin interacting protein 1 related b.
   
 
  0.492
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.