STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
itga6Integrin, alpha 6a; Belongs to the integrin alpha chain family. (1094 aa)    
Predicted Functional Partners:
LAMA2
Laminin subunit alpha 2.
   
 0.950
lama4
Laminin, alpha 4.
   
 0.948
lamc2
Laminin, gamma 2.
   
 0.937
lamc3
Laminin, gamma 3.
   
 0.935
lamc1
Laminin, gamma 1.
   
 0.935
LOC105019428
Integrin beta; Belongs to the integrin beta chain family.
   
 0.929
LOC105017753
Integrin beta; Belongs to the integrin beta chain family.
   
 0.929
lamb3
Uncharacterized protein.
   
 0.926
LOC105007961
Laminin, beta 1b.
    
 0.920
LAMB1
Laminin, beta 1a.
    
 0.920
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.