STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppt1Palmitoyl-protein thioesterase 1. (303 aa)    
Predicted Functional Partners:
LOC105031354
Zgc:66024.
     
0.911
LOC105028023
Palmitoyl-protein thioesterase 2.
     
0.911
LOC105017915
PKS_ER domain-containing protein.
     
 0.904
cln3
Battenin.
    
 
 0.679
LOC105024410
Acyl-CoA synthetase long chain family member 4a.
   
 
 0.674
LOC105017721
Acyl-CoA synthetase long chain family member 3b.
   
 
 0.674
LOC105025984
Acyl-CoA synthetase long chain family member 4b.
   
 
 0.674
acsl3
Uncharacterized protein.
   
 
 0.674
LOC105021095
Acyl-CoA synthetase long chain family member 1a.
   
 
 0.663
acsl5
Acyl-CoA synthetase long chain family member 5.
   
 
 0.663
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.