STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105028792Uncharacterized protein. (329 aa)    
Predicted Functional Partners:
LOC105023750
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.679
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.679
LOC105015026
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.676
arl3
ADP ribosylation factor like GTPase 3; Belongs to the small GTPase superfamily. Arf family.
   
 0.676
nphp3
Nephronophthisis 3.
    
 0.664
wdr90
WD repeat domain 90.
   
 0.563
rp2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
     
 0.529
xpc
Xeroderma pigmentosum, complementation group C.
    
 0.511
LOC105010775
Doublecortin-like kinase 1b.
   
 0.479
dclk1
Doublecortin-like kinase 1a.
   
 0.479
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.