STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccnb1ip1Cyclin B1 interacting protein 1. (260 aa)    
Predicted Functional Partners:
ENSELUP00000015834
Uncharacterized protein.
      
 0.691
ENSELUP00000008155
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.642
mlh1
MutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli).
      
 0.590
mlh3
MutL homolog 3 (E. coli).
      
 0.589
mus81
MUS81 structure-specific endonuclease subunit.
      
 0.585
tex11
Testis expressed 11.
      
 0.545
rnf212
Ring finger protein 212.
   
  
 0.526
msh2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
      
 0.504
prim2
DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands.
      
 0.497
smc3
Structural maintenance of chromosomes protein.
      
 0.461
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.