STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC106024425Uncharacterized protein. (1527 aa)    
Predicted Functional Partners:
ENSELUP00000004023
Uncharacterized protein.
   
 0.726
wdr6
WD repeat domain 6.
   
 0.604
epsti1
Epithelial stromal interaction 1.
   
 
 0.601
hepacam2
HEPACAM family member 2.
      
 0.586
LOC105012928
Interferon-induced protein 35.
   
 
 0.537
cmpk2
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
  
 
 0.516
ift81
Intraflagellar transport 81 homolog.
    
 0.514
rsad2
Radical S-adenosyl methionine domain-containing protein 2.
   
  
 0.504
ifih1
Interferon induced with helicase C domain 1.
   
 0.476
ift88
Intraflagellar transport 88 homolog.
    
 0.475
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.