Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSELUP00000001617 | LOC105015627 | ENSELUP00000001617 | ENSELUP00000027554 | AT rich interactive domain 4A (RBP1-like). | Retinoblastoma binding protein 4. | 0.985 |
ENSELUP00000001617 | arid4b | ENSELUP00000001617 | ENSELUP00000018946 | AT rich interactive domain 4A (RBP1-like). | Translocase of outer mitochondrial membrane 20. | 0.633 |
LOC105015627 | ENSELUP00000001617 | ENSELUP00000027554 | ENSELUP00000001617 | Retinoblastoma binding protein 4. | AT rich interactive domain 4A (RBP1-like). | 0.985 |
LOC105015627 | LOC105026629 | ENSELUP00000027554 | ENSELUP00000032004 | Retinoblastoma binding protein 4. | CRC domain-containing protein. | 0.983 |
LOC105015627 | arid4b | ENSELUP00000027554 | ENSELUP00000018946 | Retinoblastoma binding protein 4. | Translocase of outer mitochondrial membrane 20. | 0.985 |
LOC105015627 | eed | ENSELUP00000027554 | ENSELUP00000026134 | Retinoblastoma binding protein 4. | Embryonic ectoderm development. | 0.968 |
LOC105015627 | hat1 | ENSELUP00000027554 | ENSELUP00000022800 | Retinoblastoma binding protein 4. | Histone acetyltransferase type B catalytic subunit; Acetylates soluble but not nucleosomal histone H4 at 'Lys-5' (H4K5ac) and 'Lys-12' (H4K12ac) and, to a lesser extent, acetylates histone H2A at 'Lys-5' (H2AK5ac). Has intrinsic substrate specificity that modifies lysine in recognition sequence GXGKXG. | 0.958 |
LOC105015627 | lin37 | ENSELUP00000027554 | ENSELUP00000040746 | Retinoblastoma binding protein 4. | Uncharacterized protein. | 0.992 |
LOC105015627 | lin52 | ENSELUP00000027554 | ENSELUP00000029484 | Retinoblastoma binding protein 4. | Uncharacterized protein. | 0.986 |
LOC105015627 | lin54 | ENSELUP00000027554 | ENSELUP00000027225 | Retinoblastoma binding protein 4. | Lin-54 DREAM MuvB core complex component. | 0.983 |
LOC105015627 | lin9 | ENSELUP00000027554 | ENSELUP00000017705 | Retinoblastoma binding protein 4. | Lin-9 DREAM MuvB core complex component. | 0.992 |
LOC105015627 | suz12 | ENSELUP00000027554 | ENSELUP00000029601 | Retinoblastoma binding protein 4. | SUZ12 polycomb repressive complex 2 subunit b. | 0.964 |
LOC105026629 | LOC105015627 | ENSELUP00000032004 | ENSELUP00000027554 | CRC domain-containing protein. | Retinoblastoma binding protein 4. | 0.983 |
LOC105026629 | lin37 | ENSELUP00000032004 | ENSELUP00000040746 | CRC domain-containing protein. | Uncharacterized protein. | 0.993 |
LOC105026629 | lin52 | ENSELUP00000032004 | ENSELUP00000029484 | CRC domain-containing protein. | Uncharacterized protein. | 0.994 |
LOC105026629 | lin54 | ENSELUP00000032004 | ENSELUP00000027225 | CRC domain-containing protein. | Lin-54 DREAM MuvB core complex component. | 0.905 |
LOC105026629 | lin9 | ENSELUP00000032004 | ENSELUP00000017705 | CRC domain-containing protein. | Lin-9 DREAM MuvB core complex component. | 0.994 |
arid4b | ENSELUP00000001617 | ENSELUP00000018946 | ENSELUP00000001617 | Translocase of outer mitochondrial membrane 20. | AT rich interactive domain 4A (RBP1-like). | 0.633 |
arid4b | LOC105015627 | ENSELUP00000018946 | ENSELUP00000027554 | Translocase of outer mitochondrial membrane 20. | Retinoblastoma binding protein 4. | 0.985 |
eed | LOC105015627 | ENSELUP00000026134 | ENSELUP00000027554 | Embryonic ectoderm development. | Retinoblastoma binding protein 4. | 0.968 |
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