STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ing1Inhibitor of growth protein. (277 aa)    
Predicted Functional Partners:
suds3
SDS3 homolog, SIN3A corepressor complex component.
    
 
 0.960
meaf6
MYST/Esa1-associated factor 6.
    
 0.846
LOC105015627
Retinoblastoma binding protein 4.
   
 0.833
rbbp7
Retinoblastoma binding protein 4, like.
   
 0.833
RBBP4
RB binding protein 4, chromatin remodeling factor.
   
 0.833
arid4b
Translocase of outer mitochondrial membrane 20.
   
 0.825
sin3a
SIN3 transcription regulator family member Aa.
   
 
 0.823
sin3b
SIN3 transcription regulator family member B.
   
 
 0.823
LOC105014060
SIN3 transcription regulator family member Ab.
   
 
 0.823
hdac8
Histone deacetylase 8; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. Histone deacetylases act via the formation of large multiprotein complexes.
   
 0.817
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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