STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105019785Ig-like domain-containing protein. (300 aa)    
Predicted Functional Partners:
LOC105030606
Ig-like domain-containing protein.
   
 0.986
LOC105008378
Ig-like domain-containing protein.
     
 
0.900
ENSELUP00000003079
Ig-like domain-containing protein.
   
0.872
ENSELUP00000015834
Uncharacterized protein.
    
 0.616
pold2
Polymerase (DNA directed), delta 2, regulatory subunit.
    
 0.570
LOC105006364
Survival of motor neuron 1, telomeric.
    
 0.548
pold1
DNA polymerase.
   
 0.547
mus81
MUS81 structure-specific endonuclease subunit.
    
 0.546
snrpe
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.528
ddx20
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.
   
 0.503
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.