STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105018368Si:ch73-330k17.3. (223 aa)    
Predicted Functional Partners:
LOC105017549
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.724
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.724
LOC105016384
RAN binding protein 2.
   
 
 0.542
LOC105013408
Si:ch211-237i5.4.
    
 0.539
gle1
GLE1 RNA export mediator.
    
 0.525
NUP214
Nucleoporin 214.
   
 0.506
aaas
Achalasia, adrenocortical insufficiency, alacrimia.
    
 0.496
nup50
Nucleoporin 50.
     
 0.481
nup93
Nuclear pore complex protein Nup93; Plays a role in the nuclear pore complex (NPC) assembly and/or maintenance; Belongs to the nucleoporin interacting component (NIC) family.
     
 0.457
ENSELUP00000013130
Nucleoporin 88.
     
 0.456
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.