Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC105026040 | ccna1 | ENSELUP00000026866 | ENSELUP00000007767 | Cyclin A2; Belongs to the cyclin family. | Cyclin A1; Belongs to the cyclin family. | 0.909 |
LOC105026040 | ccne2 | ENSELUP00000026866 | ENSELUP00000008967 | Cyclin A2; Belongs to the cyclin family. | Cyclin E2; Belongs to the cyclin family. | 0.839 |
LOC105026040 | cdc16 | ENSELUP00000026866 | ENSELUP00000010639 | Cyclin A2; Belongs to the cyclin family. | Cell division cycle 16 homolog (S. cerevisiae). | 0.830 |
LOC105026040 | cdc23 | ENSELUP00000026866 | ENSELUP00000023227 | Cyclin A2; Belongs to the cyclin family. | CDC23 (cell division cycle 23, yeast, homolog). | 0.826 |
LOC105026040 | cdc27 | ENSELUP00000026866 | ENSELUP00000012397 | Cyclin A2; Belongs to the cyclin family. | Cell division cycle 27. | 0.889 |
LOC105026040 | cdc6 | ENSELUP00000026866 | ENSELUP00000009381 | Cyclin A2; Belongs to the cyclin family. | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | 0.997 |
LOC105026040 | cdc7 | ENSELUP00000026866 | ENSELUP00000019666 | Cyclin A2; Belongs to the cyclin family. | Cell division cycle 7 homolog (S. cerevisiae). | 0.472 |
LOC105026040 | cdk17 | ENSELUP00000026866 | ENSELUP00000029825 | Cyclin A2; Belongs to the cyclin family. | Cyclin-dependent kinase 17. | 0.787 |
LOC105026040 | orc2 | ENSELUP00000026866 | ENSELUP00000034134 | Cyclin A2; Belongs to the cyclin family. | Origin recognition complex, subunit 2. | 0.726 |
atr | cdc27 | ENSELUP00000006242 | ENSELUP00000012397 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Cell division cycle 27. | 0.434 |
atr | cdc6 | ENSELUP00000006242 | ENSELUP00000009381 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | 0.870 |
atr | cdc7 | ENSELUP00000006242 | ENSELUP00000019666 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Cell division cycle 7 homolog (S. cerevisiae). | 0.993 |
atr | cdk17 | ENSELUP00000006242 | ENSELUP00000029825 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Cyclin-dependent kinase 17. | 0.760 |
atr | orc2 | ENSELUP00000006242 | ENSELUP00000034134 | ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family. | Origin recognition complex, subunit 2. | 0.745 |
ccna1 | LOC105026040 | ENSELUP00000007767 | ENSELUP00000026866 | Cyclin A1; Belongs to the cyclin family. | Cyclin A2; Belongs to the cyclin family. | 0.909 |
ccna1 | ccne2 | ENSELUP00000007767 | ENSELUP00000008967 | Cyclin A1; Belongs to the cyclin family. | Cyclin E2; Belongs to the cyclin family. | 0.819 |
ccna1 | cdc16 | ENSELUP00000007767 | ENSELUP00000010639 | Cyclin A1; Belongs to the cyclin family. | Cell division cycle 16 homolog (S. cerevisiae). | 0.828 |
ccna1 | cdc23 | ENSELUP00000007767 | ENSELUP00000023227 | Cyclin A1; Belongs to the cyclin family. | CDC23 (cell division cycle 23, yeast, homolog). | 0.826 |
ccna1 | cdc27 | ENSELUP00000007767 | ENSELUP00000012397 | Cyclin A1; Belongs to the cyclin family. | Cell division cycle 27. | 0.889 |
ccna1 | cdc6 | ENSELUP00000007767 | ENSELUP00000009381 | Cyclin A1; Belongs to the cyclin family. | Cell division control protein; Involved in the initiation of DNA replication. Also participates in checkpoint controls that ensure DNA replication is completed before mitosis is initiated; Belongs to the CDC6/cdc18 family. | 0.997 |
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