STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
golga3Golgin A3. (1503 aa)    
Predicted Functional Partners:
tmf1
TATA element modulatory factor 1.
   
 
 0.613
gopc
Golgi-associated PDZ and coiled-coil motif containing.
   
 
 0.609
trappc8
Trafficking protein particle complex 8.
   
 
 0.598
LOC105030587
Rho family GTPase 2.
    
 0.596
LOC105013317
Rho family GTPase 2.
    
 0.596
rnpc3
RNA-binding region (RNP1, RRM) containing 3.
   
  
 0.590
LOC105011486
Protein phosphatase 2, regulatory subunit A, beta b.
   
  0.587
vrk1
VRK serine/threonine kinase 1; Belongs to the protein kinase superfamily.
    
 0.585
LOC105030346
VRK serine/threonine kinase 2.
    
 0.585
pick1
Protein interacting with prkca 1.
      
 0.582
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.