STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
frrs1lFerric-chelate reductase 1-like. (314 aa)    
Predicted Functional Partners:
LOC105008177
Mitochondrial 39S ribosomal protein L23.
   
 
 0.901
mrpl46
Mitochondrial ribosomal protein L46.
   
 
 0.872
mrpl3
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
   0.871
mrpl47
39S ribosomal protein L47, mitochondrial.
   
 
 0.862
mrpl19
Mitochondrial ribosomal protein L19.
   
 
 0.859
mrpl22
Mitochondrial ribosomal protein L22; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.857
mrpl16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.856
mrpl4
Mitochondrial 39S ribosomal protein L4.
   
 
 0.848
mrpl13
39S ribosomal protein L13, mitochondrial.
   
 
 0.848
mrps15
Mitochondrial ribosomal protein S15; Belongs to the universal ribosomal protein uS15 family.
   
   0.845
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.