STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3TC1SH3 domain and tetratricopeptide repeats 1. (1148 aa)    
Predicted Functional Partners:
ablim2
Actin binding LIM protein family, member 2.
      
 0.625
emsy
EMSY transcriptional repressor, BRCA2 interacting.
      
 0.588
LOC105026281
SH3 domain and tetratricopeptide repeats 2.
      
0.582
FIG4
FIG4 phosphoinositide 5-phosphatase.
      
 0.506
glt8d2
Glycosyltransferase 8 domain containing 2.
      
 0.461
glt8d1
Glycosyltransferase 8 domain containing 1.
      
 0.461
gdap1
Ganglioside induced differentiation associated protein 1; Belongs to the GST superfamily.
      
 0.426
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.