STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105015567Protein phosphatase, Mg2+/Mn2+ dependent, 1Aa. (421 aa)    
Predicted Functional Partners:
MAP2K4
Mitogen-activated protein kinase kinase 4; Belongs to the protein kinase superfamily.
   
 
 0.918
LOC105023011
Mitogen-activated protein kinase kinase 4b; Belongs to the protein kinase superfamily.
   
 
 0.918
map2k7
Mitogen-activated protein kinase kinase 7.
   
 0.917
LOC105027407
Mitogen-activated protein kinase kinase 6.
    
 0.916
LOC105031287
Protein kinase domain-containing protein.
    
 0.916
prkaa1
Non-specific serine/threonine protein kinase.
   
 0.524
prkaa2
Non-specific serine/threonine protein kinase.
   
 0.524
mtfmt
Mitochondrial methionyl-tRNA formyltransferase.
  
   0.483
bckdhb
Branched chain keto acid dehydrogenase E1 subunit beta.
  
 0.476
LOC105014760
Ubiquitin-conjugating enzyme E2L 3a; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.469
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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