STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105012741Dystrobrevin binding protein 1b. (247 aa)    
Predicted Functional Partners:
bloc1s6
Biogenesis of lysosomal organelles complex-1, subunit 6, pallidin.
    
 0.981
bloc1s1
Biogenesis of lysosomal organelles complex-1, subunit 1.
   
 0.975
snapin
SNAP associated protein.
   
 0.974
Bloc1s3
Biogenesis of lysosomal organelles complex-1, subunit 3.
    
 0.947
LOC105012743
Biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino.
   
 0.916
bloc1s2
Biogenesis of lysosomal organelles complex-1, subunit 2.
    
 
 0.914
bloc1s5
Biogenesis of lysosomal organelles complex-1, subunit 5, muted.
    
 
 0.881
swi5
SWI5 homologous recombination repair protein.
    
 
 0.839
hps5
Hermansky-Pudlak syndrome 5 protein homolog; May regulate the synthesis and function of lysosomes and of highly specialized organelles, such as melanosomes and platelet dense granules.
      
 0.634
Disc1
Uncharacterized protein.
      
 0.598
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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