STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eml3EMAP like 3. (1002 aa)    
Predicted Functional Partners:
mad2l1
MAD2 mitotic arrest deficient-like 1 (yeast).
   
 0.752
LOC105016384
RAN binding protein 2.
   
 0.731
ift140
Intraflagellar transport 140 homolog (Chlamydomonas).
    
 0.699
bub3
BUB3 mitotic checkpoint protein.
   
 0.686
Mad1l1
Mitotic arrest deficient 1 like 1.
    
 0.685
bub1
BUB1 mitotic checkpoint serine/threonine kinase.
   
 0.669
taf12
TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor.
   
 0.667
taf9
Uncharacterized protein.
    
 0.663
taf10
Uncharacterized protein.
    
 0.661
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.651
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.