STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpsf3Cleavage and polyadenylation specific factor 3. (690 aa)    
Predicted Functional Partners:
cpsf2
Cleavage and polyadenylation specificity factor subunit 2.
   
0.999
cpsf4
Cleavage and polyadenylation specific factor 4.
   
 0.999
cpsf1
Cleavage and polyadenylation specific factor 1.
   
 0.999
WDR33
WD repeat domain 33.
   
 0.999
sympk
Symplekin.
   
 0.999
fip1l1
FIP1 like 1a (S. cerevisiae).
    
 0.995
cstf2
RRM domain-containing protein.
   
 0.990
pcf11
PCF11 cleavage and polyadenylation factor subunit.
   
 0.990
WDR77
WD repeat domain 77.
   
 0.980
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
   
 0.980
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.