Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ISL2 | barx1 | ENSELUP00000003671 | ENSELUP00000035067 | ISL LIM homeobox 2b. | BARX homeobox 1. | 0.448 |
LOC105021495 | barx1 | ENSELUP00000010131 | ENSELUP00000035067 | Myomesin 2a. | BARX homeobox 1. | 0.442 |
TBX22 | barx1 | ENSELUP00000004030 | ENSELUP00000035067 | T-box transcription factor 22. | BARX homeobox 1. | 0.451 |
barx1 | ISL2 | ENSELUP00000035067 | ENSELUP00000003671 | BARX homeobox 1. | ISL LIM homeobox 2b. | 0.448 |
barx1 | LOC105021495 | ENSELUP00000035067 | ENSELUP00000010131 | BARX homeobox 1. | Myomesin 2a. | 0.442 |
barx1 | TBX22 | ENSELUP00000035067 | ENSELUP00000004030 | BARX homeobox 1. | T-box transcription factor 22. | 0.451 |
barx1 | bmp4 | ENSELUP00000035067 | ENSELUP00000030267 | BARX homeobox 1. | Bone morphogenetic protein 4. | 0.468 |
barx1 | ercc4 | ENSELUP00000035067 | ENSELUP00000019809 | BARX homeobox 1. | Excision repair cross-complementation group 4. | 0.516 |
barx1 | fgf3 | ENSELUP00000035067 | ENSELUP00000022379 | BARX homeobox 1. | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | 0.531 |
barx1 | lhx6 | ENSELUP00000035067 | ENSELUP00000004801 | BARX homeobox 1. | LIM homeobox 6. | 0.627 |
barx1 | msx1 | ENSELUP00000035067 | ENSELUP00000033070 | BARX homeobox 1. | Muscle segment homeobox 1a. | 0.469 |
barx1 | nkx3-2 | ENSELUP00000035067 | ENSELUP00000019436 | BARX homeobox 1. | NK3 homeobox 2. | 0.549 |
barx1 | pax9 | ENSELUP00000035067 | ENSELUP00000040780 | BARX homeobox 1. | Paired box 9. | 0.629 |
bmp4 | barx1 | ENSELUP00000030267 | ENSELUP00000035067 | Bone morphogenetic protein 4. | BARX homeobox 1. | 0.468 |
bmp4 | msx1 | ENSELUP00000030267 | ENSELUP00000033070 | Bone morphogenetic protein 4. | Muscle segment homeobox 1a. | 0.576 |
bmp4 | pax9 | ENSELUP00000030267 | ENSELUP00000040780 | Bone morphogenetic protein 4. | Paired box 9. | 0.483 |
ercc4 | barx1 | ENSELUP00000019809 | ENSELUP00000035067 | Excision repair cross-complementation group 4. | BARX homeobox 1. | 0.516 |
fgf3 | barx1 | ENSELUP00000022379 | ENSELUP00000035067 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | BARX homeobox 1. | 0.531 |
fgf3 | lhx6 | ENSELUP00000022379 | ENSELUP00000004801 | Fibroblast growth factor; Belongs to the heparin-binding growth factors family. | LIM homeobox 6. | 0.591 |
lhx6 | barx1 | ENSELUP00000004801 | ENSELUP00000035067 | LIM homeobox 6. | BARX homeobox 1. | 0.627 |
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