STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105028158Zinc finger, FYVE domain containing 9b. (713 aa)    
Predicted Functional Partners:
Ptpn23
Protein tyrosine phosphatase, non-receptor type 23, a.
   
 
 0.616
LOC105031060
Mothers against decapentaplegic homolog.
    
 0.610
ENSELUP00000015901
Mothers against decapentaplegic homolog.
    
 0.610
SMAD4
Mothers against decapentaplegic homolog.
    
 0.610
LOC105025164
Mothers against decapentaplegic homolog.
    
 0.610
SMAD1
Mothers against decapentaplegic homolog.
   
 0.576
smad2
Mothers against decapentaplegic homolog.
   
 0.576
ENSELUP00000014330
SMAD family member 1.
   
 0.576
SMAD1-2
SMAD family member 1.
   
 0.576
smad5
Mothers against decapentaplegic homolog.
   
 0.576
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.