STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msrb1Methionine sulfoxide reductase B1b. (101 aa)    
Predicted Functional Partners:
msra
Methionine sulfoxide reductase A.
  
 
 0.771
LOC105020550
Thioredoxin; Belongs to the thioredoxin family.
   
 0.762
LOC105009242
Thioredoxin domain-containing protein.
   
 0.681
mrpl20
39S ribosomal protein L20, mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.657
txnrd2
Thioredoxin reductase 2, tandem duplicate 2.
  
  
 0.648
LOC105029881
NME/NM23 family member 8; Belongs to the NDK family.
  
 0.607
ENSELUP00000016891
NDK domain-containing protein.
  
 0.607
Nme8
NDK domain-containing protein.
  
 0.607
selenok
Selenoprotein K.
      
 0.601
selenot
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
      
 0.595
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.