STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPUL1Heterogeneous nuclear ribonucleoprotein U like 1. (899 aa)    
Predicted Functional Partners:
LOC105023489
Serine and arginine rich splicing factor 1a.
   
 0.693
hnrnpk
Heterogeneous nuclear ribonucleoprotein K.
   
 0.686
LOC105027930
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.686
LOC105011496
Heterogeneous nuclear ribonucleoprotein M.
   
 0.679
Polr2a
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.639
polr2f
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
     
 0.607
LOC105026271
Heterogeneous nuclear ribonucleoprotein H1.
   
 0.597
LOC105011303
Heterogeneous nuclear ribonucleoprotein H1, like.
   
 0.597
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.597
ncbp2
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.592
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.