STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmigd1Transmembrane and immunoglobulin domain containing 1. (257 aa)    
Predicted Functional Partners:
LOC105017238
Uncharacterized protein.
   
  
 0.724
clrn3
Clarin 3.
   
  
 0.645
mrm3
SpoU_sub_bind domain-containing protein.
      
 0.554
slc10a2
Solute carrier family 10 member 2.
   
  
 0.463
ENSELUP00000014446
Uncharacterized protein.
   
  
 0.463
ENSELUP00000034338
Solute carrier family 10 member 3.
   
  
 0.463
mturn
Maturin, neural progenitor differentiation regulator homolog (Xenopus).
      
 0.424
Your Current Organism:
Esox lucius
NCBI taxonomy Id: 8010
Other names: E. lucius, northern pike
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.