Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSELUP00000005532 | ENSELUP00000033130 | ENSELUP00000005532 | ENSELUP00000033130 | Matrin-type domain-containing protein. | Uncharacterized protein. | 0.864 |
ENSELUP00000005532 | SMU1 | ENSELUP00000005532 | ENSELUP00000041674 | Matrin-type domain-containing protein. | SMU1 DNA replication regulator and spliceosomal factor. | 0.890 |
ENSELUP00000005532 | ik | ENSELUP00000005532 | ENSELUP00000027758 | Matrin-type domain-containing protein. | Uncharacterized protein. | 0.863 |
ENSELUP00000005532 | lsm8 | ENSELUP00000005532 | ENSELUP00000032264 | Matrin-type domain-containing protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.719 |
ENSELUP00000005532 | mfap1 | ENSELUP00000005532 | ENSELUP00000001290 | Matrin-type domain-containing protein. | Microfibril associated protein 1. | 0.915 |
ENSELUP00000005532 | prpf38a | ENSELUP00000005532 | ENSELUP00000040546 | Matrin-type domain-containing protein. | Pre-mRNA processing factor 38A. | 0.914 |
ENSELUP00000005532 | prpf6 | ENSELUP00000005532 | ENSELUP00000000355 | Matrin-type domain-containing protein. | PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). | 0.909 |
ENSELUP00000005532 | prpf8 | ENSELUP00000005532 | ENSELUP00000030003 | Matrin-type domain-containing protein. | Pre-mRNA processing factor 8. | 0.617 |
ENSELUP00000005532 | snrnp200 | ENSELUP00000005532 | ENSELUP00000019584 | Matrin-type domain-containing protein. | Small nuclear ribonucleoprotein 200 (U5). | 0.932 |
ENSELUP00000005532 | zmat2 | ENSELUP00000005532 | ENSELUP00000041120 | Matrin-type domain-containing protein. | Zinc finger matrin-type protein 2. | 0.921 |
ENSELUP00000033130 | ENSELUP00000005532 | ENSELUP00000033130 | ENSELUP00000005532 | Uncharacterized protein. | Matrin-type domain-containing protein. | 0.864 |
ENSELUP00000033130 | SMU1 | ENSELUP00000033130 | ENSELUP00000041674 | Uncharacterized protein. | SMU1 DNA replication regulator and spliceosomal factor. | 0.878 |
ENSELUP00000033130 | lsm8 | ENSELUP00000033130 | ENSELUP00000032264 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.828 |
ENSELUP00000033130 | mfap1 | ENSELUP00000033130 | ENSELUP00000001290 | Uncharacterized protein. | Microfibril associated protein 1. | 0.980 |
ENSELUP00000033130 | prpf38a | ENSELUP00000033130 | ENSELUP00000040546 | Uncharacterized protein. | Pre-mRNA processing factor 38A. | 0.977 |
ENSELUP00000033130 | prpf6 | ENSELUP00000033130 | ENSELUP00000000355 | Uncharacterized protein. | PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae). | 0.871 |
ENSELUP00000033130 | prpf8 | ENSELUP00000033130 | ENSELUP00000030003 | Uncharacterized protein. | Pre-mRNA processing factor 8. | 0.986 |
ENSELUP00000033130 | snrnp200 | ENSELUP00000033130 | ENSELUP00000019584 | Uncharacterized protein. | Small nuclear ribonucleoprotein 200 (U5). | 0.737 |
ENSELUP00000033130 | zmat2 | ENSELUP00000033130 | ENSELUP00000041120 | Uncharacterized protein. | Zinc finger matrin-type protein 2. | 0.925 |
SMU1 | ENSELUP00000005532 | ENSELUP00000041674 | ENSELUP00000005532 | SMU1 DNA replication regulator and spliceosomal factor. | Matrin-type domain-containing protein. | 0.890 |
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