STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VM44Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. (469 aa)    
Predicted Functional Partners:
A0A060VZR1
WD_REPEATS_REGION domain-containing protein.
   
 0.979
A0A060YN62
WD_REPEATS_REGION domain-containing protein.
   
 0.978
A0A060Z2K2
Uncharacterized protein.
   
 0.978
A0A060VQG5
WD_REPEATS_REGION domain-containing protein.
   
 0.977
A0A060WYC4
Dynein light chain roadblock.
    
 0.976
A0A060XJM1
Dynein light chain roadblock.
    
 0.976
A0A060Y6Y1
Dynein light chain roadblock.
    
 0.976
A0A060X4L8
Uncharacterized protein.
    
 0.969
A0A060WWV6
Uncharacterized protein.
    
 0.967
A0A060XW62
WD_REPEATS_REGION domain-containing protein.
   
 0.967
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.