STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VM68Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (273 aa)    
Predicted Functional Partners:
A0A060VQF0
Uncharacterized protein.
   
 0.999
A0A060WA34
Cytochrome c domain-containing protein.
 
 0.999
A0A060X5D4
Uncharacterized protein.
   
 0.999
A0A060XIP1
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
 0.999
A0A060XKF8
Uncharacterized protein.
   
 0.999
A0A060XUW9
Uncharacterized protein.
   
 0.999
A0A060XXS7
Reverse transcriptase domain-containing protein; Belongs to the complex I 49 kDa subunit family.
  
 0.999
A0A060Y6N1
Peptidase_M16_C domain-containing protein.
   
 0.999
A0A060Y8W6
Uncharacterized protein.
   
 0.999
A0A060YQD8
Uncharacterized protein.
   
 0.999
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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