STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VPS5GATA-N domain-containing protein. (197 aa)    
Predicted Functional Partners:
A0A060YDU5
Homeobox domain-containing protein.
   
 0.933
A0A060YRJ6
Homeobox domain-containing protein.
   
 0.933
RBTN2
Rhombotin-2.
    
 0.904
A0A060XAD0
Homeobox domain-containing protein.
   
 0.895
A0A060X1L1
Uncharacterized protein.
    
 0.888
A0A060W2S4
Uncharacterized protein.
   
 0.880
RHOA
Transforming protein RhoA.
   
 0.880
A0A060W964
Uncharacterized protein.
    
 0.862
A0A060XJV0
Uncharacterized protein.
   
 0.862
A0A060XQS0
Uncharacterized protein.
   
 0.862
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.