STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VPY1Uncharacterized protein. (479 aa)    
Predicted Functional Partners:
A0A060Z392
Uncharacterized protein.
    
 0.743
A0A060VWQ3
Uncharacterized protein.
    
 0.664
A0A060WD77
Uncharacterized protein.
    
 0.664
A0A060WHR2
Uncharacterized protein.
    
 0.664
A0A060WL66
Uncharacterized protein.
    
 0.664
A0A060WMH3
Uncharacterized protein.
    
 0.664
A0A060WZS6
Uncharacterized protein.
    
 0.664
A0A060XEB4
Uncharacterized protein.
    
 0.664
A0A060XFG2
Uncharacterized protein.
    
 0.664
A0A060XNE3
Uncharacterized protein.
    
 0.664
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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