STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VR70Uncharacterized protein. (460 aa)    
Predicted Functional Partners:
A0A060W295
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
  
 0.514
A0A060WAS6
Endo/exonuclease/phosphatase domain-containing protein.
   
  
 0.508
A0A060YUP7
Uncharacterized protein.
      
 0.446
A0A060WGW1
ANK_REP_REGION domain-containing protein.
    
 
 0.432
A0A060WU24
ANK_REP_REGION domain-containing protein.
    
 
 0.432
A0A060YGA1
ANK_REP_REGION domain-containing protein.
    
 
 0.432
Q8QFQ0_ONCMY
Inhibitor of nuclear factor kappa B alpha.
    
 
 0.432
A0A061A268
Uncharacterized protein.
    
 0.427
A0A060XD78
Ribosomal_L7Ae domain-containing protein.
      
 0.426
A0A060XWN4
Ribosomal_L7Ae domain-containing protein.
      
 0.426
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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