STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VRD9Uncharacterized protein. (252 aa)    
Predicted Functional Partners:
A0A060XYG5
Uncharacterized protein.
  
0.999
A0A060W535
Uncharacterized protein.
 
 
 0.961
A0A060WRH5
Ketoacyl_synth_N domain-containing protein.
  
 0.955
A0A060X7W0
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.955
A0A060XAT3
S5A_REDUCTASE domain-containing protein.
     
 0.947
A0A060WV17
Uncharacterized protein.
 
 
 0.939
A0A060VZW2
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
 0.937
A0A060W960
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
 0.937
A0A060XWU0
3-oxo-5-alpha-steroid 4-dehydrogenase (NADP(+)).
   
 
 0.932
Q91381_ONCMY
3 beta-hydroxysteroid dehydrogenase; Belongs to the 3-beta-HSD family.
  
 0.932
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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