STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VRP8Uncharacterized protein. (1199 aa)    
Predicted Functional Partners:
A0A060VXD0
Microtubule associated protein 1 light chain 3 beta.
    
 0.809
A0A060W4L2
Uncharacterized protein.
    
 
 0.711
A0A060WMS0
Uncharacterized protein.
    
 
 0.711
A0A060VTR5
Uncharacterized protein.
    
 
 0.695
A0A060X5W8
Uncharacterized protein.
    
 
 0.695
A0A060WV99
Uncharacterized protein.
    
 
 0.692
A0A060WWB2
Uncharacterized protein.
    
 
 0.692
A0A060XFB7
Uncharacterized protein.
    
 
 0.692
A0A060W5N0
Uncharacterized protein.
    
 0.682
A0A060Y8J1
Uncharacterized protein.
    
 0.682
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.