STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VRU7Uncharacterized protein. (769 aa)    
Predicted Functional Partners:
A0A060Z2G8
Uncharacterized protein.
   
 
  0.530
A0A060Z2A4
MIT domain-containing protein.
      
 0.453
A0A060Y4S6
Dynein light chain.
     
 0.430
A0A060W2G9
Uncharacterized protein.
   
 
  0.415
A0A060WES2
Uncharacterized protein.
   
 
  0.415
A0A060WXP4
Uncharacterized protein.
     
 0.415
A0A060WY55
Uncharacterized protein.
     
 0.415
A0A060WYS4
Uncharacterized protein.
     
 0.415
A0A060WZQ2
Uncharacterized protein.
   
 
  0.415
A0A060XED8
Cation-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type V subfamily.
     
 0.415
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.