STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VT40Uncharacterized protein. (499 aa)    
Predicted Functional Partners:
A0A060XEB9
Uncharacterized protein.
   
 0.902
A0A060XQZ5
Uncharacterized protein.
   
 0.902
A0A060X9E2
Uncharacterized protein.
   
 0.817
A0A060VTA5
Uncharacterized protein.
   
 0.649
A0A060VYX0
Uncharacterized protein.
   
 0.649
A0A060W432
Uncharacterized protein.
   
 0.649
A0A060W4L7
Uncharacterized protein.
   
 0.649
A0A060WCH4
Uncharacterized protein.
   
 0.649
A0A060WQ56
Uncharacterized protein.
   
 0.649
A0A060WRS4
Ig-like domain-containing protein.
   
 0.649
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.