STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VTZ3TPR_REGION domain-containing protein. (573 aa)    
Predicted Functional Partners:
A0A060WRR5
ABC_transp_aux domain-containing protein.
  
 0.992
A0A060YQD1
TPR_REGION domain-containing protein.
    
 0.991
A0A060X9P5
Uncharacterized protein.
  
 0.990
A0A060W7B4
Uncharacterized protein.
    
 0.988
A0A060YG71
Uncharacterized protein.
  
 0.983
A0A060VUW1
Uncharacterized protein.
  
 
 0.982
A0A060WT14
Uncharacterized protein.
   
 0.978
A0A060WR13
Choline dehydrogenase.
    
 0.974
A0A060XHK8
WD_REPEATS_REGION domain-containing protein.
  
 0.963
A0A060XH34
Uncharacterized protein.
  
 0.961
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.