STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VUI8CC2D2AN-C2 domain-containing protein. (153 aa)    
Predicted Functional Partners:
A0A060X2A5
Uncharacterized protein.
    
 0.907
A0A060W7L6
DUF1619 domain-containing protein.
    
 0.896
A0A060XA24
DUF1619 domain-containing protein.
    
 0.896
A0A060WSE3
Uncharacterized protein.
    
 0.891
A0A060YK97
Uncharacterized protein.
    
 0.891
A0A060YBR9
Uncharacterized protein.
     
 0.860
A0A060YB99
Uncharacterized protein.
     
 0.795
A0A060VXK7
Uncharacterized protein.
    
 0.785
A0A060WJL8
Uncharacterized protein.
    
 0.785
A0A060WJZ4
Uncharacterized protein.
    
 0.785
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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