STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VV89Uncharacterized protein. (332 aa)    
Predicted Functional Partners:
A0A060X2B3
Brix domain-containing protein.
   
    0.750
A0A060Y4Z4
WD_REPEATS_REGION domain-containing protein.
   
   0.719
A0A060YMW0
WD_REPEATS_REGION domain-containing protein.
   
   0.719
A0A060YCD3
Uncharacterized protein.
   
   0.662
A0A060YWK0
Uncharacterized protein.
   
   0.662
TR112
TRM112-like protein.
   
  
 0.532
A0A060YTH0
Uncharacterized protein.
   
  
 0.517
A0A060W6I8
Lactamase_B domain-containing protein.
      
 0.509
A0A060XXQ1
COMM domain-containing protein.
   
  
 0.506
A0A060Y029
Uncharacterized protein.
      
 0.505
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.