STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VVB0RGS domain-containing protein. (178 aa)    
Predicted Functional Partners:
A0A060W8V2
Uncharacterized protein.
   
 0.878
A0A060YAW4
Uncharacterized protein.
  
 0.837
A0A060Y8R0
Uncharacterized protein.
  
 0.835
A0A060XTK7
Uncharacterized protein.
  
 0.831
A0A060Z4B9
Uncharacterized protein.
  
 0.831
A0A060VZ80
Uncharacterized protein.
   
 0.796
A0A060W476
Uncharacterized protein.
   
 0.796
A0A060W6W6
Uncharacterized protein.
   
 0.796
A0A060W808
Uncharacterized protein.
   
 0.796
A0A060W961
Uncharacterized protein.
   
 0.796
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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