STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VX91Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends. (220 aa)    
Predicted Functional Partners:
A0A060WV21
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.999
A0A060YXI0
POP1 domain-containing protein.
   
 0.999
A0A060YYZ8
Alba domain-containing protein.
    
 0.998
A0A060W3G4
Uncharacterized protein.
   
 0.997
A0A060W837
Uncharacterized protein.
   
 0.997
A0A060WAI6
Uncharacterized protein.
   
 0.997
A0A060XZD2
Ribosomal_L7Ae domain-containing protein.
   
 0.997
A0A060Y390
Ribosomal_L7Ae domain-containing protein.
   
 0.997
A0A060YJ82
Uncharacterized protein.
    
 0.997
A0A060WL92
Uncharacterized protein.
    
 0.996
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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