STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060VZ84Uncharacterized protein. (489 aa)    
Predicted Functional Partners:
A0A060Z6P4
Uncharacterized protein.
     
 0.953
A0A060WR25
Uncharacterized protein.
  
  
 
0.910
A0A060Z191
Uncharacterized protein.
     
 0.826
A0A060VN69
Peptidase M12B domain-containing protein.
     
 0.738
A0A060YDN5
Spondin domain-containing protein.
     
 0.705
A0A060WQB1
PLAC domain-containing protein.
     
 0.654
A0A060X2T7
PLAC domain-containing protein.
     
 0.654
A0A060Z9I4
ADAM_spacer1 domain-containing protein.
     
 0.654
A0A060WZT9
Reelin domain-containing protein.
     
 0.649
A0A060X537
Spondin domain-containing protein.
     
 0.649
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.