STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060W3S8Uncharacterized protein. (391 aa)    
Predicted Functional Partners:
A0A060WJH6
Uncharacterized protein.
  
  
 
0.863
A0A060YR36
Uncharacterized protein.
  
  
 
0.845
A0A060W0S4
Uncharacterized protein.
  
  
 
0.838
A0A060W9Y8
Uncharacterized protein.
   
 
 0.838
A0A060Y2Q6
Uncharacterized protein.
    
 0.836
A0A060VSE6
Uncharacterized protein.
   
 
  0.528
A0A060WGJ6
Uncharacterized protein.
   
 
  0.528
A0A060XHC3
Uncharacterized protein.
   
 
  0.528
A0A060WP52
CAP10 domain-containing protein.
      
 0.487
A0A060VY40
Uncharacterized protein.
      
 0.451
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.