STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060W534PBPe domain-containing protein. (256 aa)    
Predicted Functional Partners:
A0A060YXW5
Uncharacterized protein; Belongs to the glutamate-gated ion channel (TC 1.A.10.1) family.
  
 0.901
A0A060YHJ4
Uncharacterized protein.
  
 0.879
A0A060Z365
Uncharacterized protein.
    
 0.875
A0A060YYD3
PDZ domain-containing protein.
    
 0.852
A0A060Z1U6
PBPe domain-containing protein.
  
0.841
A0A060W930
Uncharacterized protein.
  
0.838
A0A060WM43
ANF_receptor domain-containing protein.
   
 0.837
A0A060VPW6
Uncharacterized protein.
   
 0.796
A0A060WG61
Uncharacterized protein.
   
 0.796
A0A060WGH0
Uncharacterized protein.
   
 0.796
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.