STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060W5K8Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins. (925 aa)    
Predicted Functional Partners:
A0A060Y1M5
Uncharacterized protein.
   
 0.912
A0A060W465
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
  
 
0.841
A0A060XBK3
Uncharacterized protein; Cadherins are calcium-dependent cell adhesion proteins.
  
  
 
0.840
A0A060W2D5
Uncharacterized protein.
    
 0.779
A0A060W5Q1
Uncharacterized protein.
    
 0.779
A0A060WZZ1
Uncharacterized protein.
    
 0.765
A0A060XJF4
Uncharacterized protein.
    
 0.765
A0A060XYI3
Uncharacterized protein.
    
 0.765
A0A060YH34
Uncharacterized protein.
    
 0.765
A0A060WHH8
Uncharacterized protein.
    
 0.756
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.