STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A060W6P5Uncharacterized protein. (417 aa)    
Predicted Functional Partners:
A0A060XB11
TPR_REGION domain-containing protein.
    
 0.989
A0A060YM12
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.986
A0A060X940
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.967
A0A060X2S6
Uncharacterized protein.
    
 0.951
A0A060YHA3
Uncharacterized protein.
    
 0.951
A0A060XBQ2
Uncharacterized protein.
   
 0.945
A0A060XVS3
Uncharacterized protein.
   
 0.945
A0A060VQ66
Uncharacterized protein.
   
 0.943
A0A060XPH4
Uncharacterized protein.
   
 0.943
A0A060XSM2
Uncharacterized protein.
   
 0.913
Your Current Organism:
Oncorhynchus mykiss
NCBI taxonomy Id: 8022
Other names: O. mykiss, Oncorhynchus nerka mykiss, Parasalmo mykiss, Salmo mykiss, rainbow trout
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.